Pacific Islands Benthic Habitat Mapping Center (PIBHMC), Coral Reef Ecosystem Division (CRED), Pacific Islands Fisheries Science Center (PIFSC), National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric Administration (NOAA)
200704
CRED Optical Validation Data at Johnston Atoll in the Pacific Remote Islands Area (PRIA), 2004, to Support Benthic Habitat Mapping
Video imagery, track line navigation files, and log sheets
https://www.soest.hawaii.edu/pibhmc/cms/
Optical validation data were collected using a Tethered Optical Assessment Device (TOAD), an underwater
sled equipped with an underwater digital video camera and lights. Data were collected in the Pacific Remote Islands
Area (PRIA), around Johnston Atoll to support Benthic Habitat Mapping efforts during NOAA Ship Oscar Elton Sette
cruise OES0401, from January 13-15, 2004.
These data provide optical observations that will be correlated with bathymetry and acoustic backscatter
imagery to develop a benthic habitat map of Johnston. Refer to supplemental information for description of
instrument and survey.
Johnston, a low-lying, 130 sq.km. atoll in the Pacific Remote Island Area (PRIA), is the
northernmost member of the Line Islands and is centered around 16 degrees 45'N 169 degrees 31'W. Its total land
area is 2.67 sq.km.
Although Johnston was unhabited at the time of its discovery by Western sailors, Polynesians probably visited it
periodically over many centuries to harvest fish and wildlife. The lack of human habitation allowed Johnston's
coral reefs to remain completely pristine until the early 20th century. Even today it lies beyond the influence of
urban centers, associated pollutants and major shipping lanes. In 1858, Johnston was claimed by the U.S. under the
Guano Act. During World War II, the U.S. constructed and occupied a military base at Johnston, adding substantially
to the size of the main island using dredged material. After World War II the base was used as a nuclear weapons
test site, a chemical weapons incineration and disposal site, and missile test facility. The military base was
closed in 2004, and is currently managed by the Department of Defense. Ocean currents transport and distribute
larvae among and between different atolls and islands, and particularly in the Pacific equatorial region, define
sea surface temperatures (SSTs) and available nutrient regimes. The North Equatorial Current (NEC), Equatorial
Counter Current (ECC), Equatorial Undercurrent or Cromwell Current (EUC), and South Equatorial Current (SEC)
provide the mechanism by which many species are distributed among the PRIAs, nearby central Pacific islands, the
main Hawaiian Islands (MHI), as well as other distant regions.
Optical validation data were collected using the Tethered Optical Assessment Device (TOAD), a sled equipped with
underwater video camera and lights. These data are used to provide ground-truth validation for benthic habitat maps
based on multibeam echosounder surveys. Camera sled deployments were conducted at night, usually between 1800 and
midnight. The duration of each tow varied but averaged about 40 minutes of bottom time at a given location. The
camera sled was deployed from the port J-frame mounted amidships on the NOAA Ship Oscar Elton Sette. At each station
the ship was positioned with the wind on the port side and drifted downwind; occasional light turns were applied to
the ship's screws if necessary to reduce the ship's motion. The TOAD was lowered slowly to the bottom by the deck
crew using a capstan. The operator monitored a live video feed from the camera and began recording data on a video
tape recorder. When the camera reached bottom the deck crew was notified by radio to stop lowering. The operator
continued to monitor the vehicle and provided commands to raise or lower it to keep the camera just above the bottom.
Equipment Description: The TOAD was deployed from the lower arm of the vessel's port side J-frame. The TOAD is a
camera sled based on the Guildline MiniBat model 8820 tow body. The frame has been extensively modified from its
original configuration and was equipped with an ROS model 54-00100-13 color underwater video camera as the primary
data collection instrument. The ROS camera was mounted to point at approximately a 45 degree angle toward the
seafloor. A Deep Sea Power and Light model 2050 MultiSeaCam low-light color video camera was also mounted on the
sled and aimed straight ahead. The signal from this camera was fed to a second video monitor to provide warning of
underwater obstructions the sled might be headed for. Illumination was provided by two 500 W DeepSea Power and Light
Multi-SeaLite model 1050 underwater lights mounted on the original sled frame. The lights were located near the
base and each side of the sled to provide the maximum possible horizontal distance from the ROS camera. Cable
between the sled and the surface consisted of a underwater electrical cable (cable 1, blue in color) with a separate
load-bearing line to support the sled frame. The electrical cable was clipped to the line at regular intervals
upon deployment and removed upon recovery. The load-bearing line was led to the starboard capstan on the aft deck.
All TOAD surface components were located in the Dry Lab in an equipment rack on the after bulkhead.
Name & address of person collecting data:
Joyce Miller
NOAA IRC
NMFS/PIFSC/CRED
1845 WASP Blvd., Building 176
Honolulu, HI 96818
Data Files: Video data were recorded on a video tape recorder. The position of the camera sled was recorded in
WGS-84 using Guildline MiniBat In-Tow data acquisition software and a data feed from a shipboard Northstar Chartplotter.
File naming convention: Each tow is given a name consisting of a three-letter designator for the island area,
followed by a two-digit year and a three-digit tow number, which increments by one for each new tow around that
island. During OES0401 (NOAA Ship Oscar Elton Sette's 1st cruise in calendar year 2004) the consecutive tows at
Johnston started at JOH04006. For following cruises, the tow numbers will increment by 100, so the first tow on
the next cruise to Johnston in 2004 will be tow number JOH04100. Video tape labels, the navigation files (*.glo) and
paper log forms are annotated with the tow name and number, e.g., JOH04012. If the navigation file is edited during
processing the file name has a suffix 'a' added. For example, for a navigation data file named JOH04012a.glo, the
'a' would indicate that metadata were extracted from the navigation data and recorded to a file with the same name
as the navigation file except that a file type of '.met' was appended; for example, 'JOH04012a.glo.met.
Time Correlation: All times are based on UTC. Two clocks were manually synchronized prior to starting data
collection; the clock in the video character generator that was used to annotate the video tape, and the clock in
the TOAD data acquisition computer. These clocks were set to UTC at the beginning of each evening's operations.
Resource Description: Digital video imagery that is geo-referenced to navigation files.
20040113
20040115
ground condition
None planned
-169.60
-169.33
16.81
16.64
NCEI Geoportal FilterCoRIS_MetadataCRCP ProjectBenthic Habitat Mapping and Characterization - American Samoa and PRIA1084
CoRIS Theme Thesaurus
EARTH SCIENCE > Biosphere > Aquatic Habitat > Benthic Habitat
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Photographic Analysis > Videography
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Mapping
None
Tethered Optical Assessment Device (TOAD)
Underwater video
OES0401
CoRIS Discovery Thesaurus
Visual Images > Habitats
ISO 19115 Topic Category
environment
biota
CoRIS Place Thesaurus
OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Johnston Atoll > Johnston Atoll (16N169W0001)
COUNTRY/TERRITORY > United States of America > USA Minor Outlying Islands > Johnston Atoll (16N169W0001)
None
Pacific Remote Islands Area
PRIA
CoRIS Region
PRIA
None
Please acknowledge the NOAA Coral Reef Ecosystem Division, Pacific Islands Fisheries Science Center as
the source of this information.
Pacific Islands Benthic Habitat Mapping Center (PIBHMC), Coral Reef Ecosystem Division (CRED), Pacific Islands Fisheries Science Center (PIFSC), National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric Administration (NOAA)
John Rooney
mailing and physical address
NOAA IRC
NMFS/PIFSC/CRED
1845 WASP Blvd., Building 176
Honolulu
HI
96818
808 725-5360
808 725-5429
nmfs.pic.credinfo@noaa.gov
e-mail preferred
Pacific Island Benthic Habitat Mapping Center, Coral Reef Ecosystem Division (CRED), Pacific Islands
Fisheries Science Center (PIFSC), NOAA
Not applicable
Unclassified
Not applicable
Unspecified
Complete
The horizontal position accuracy for the camera sled position is estimated at
plus or minus 100 meters. There are three primary sources of this error. The ship's positioning is based on GPS
SPS, often called standalone or non-differential GPS positioning. SPS has a measured accuracy of under 5 meters. The
position of the GPS antenna is used; no attempt is made to translocate this position to that of the tow block from
which the camera is deployed. The difference between the tow block and the antenna is about 14 meters. The largest
source of error is uncertainty associated with the sled's position relative to the tow block.
After a tow was completed the video tape data was reviewed by spot-checking the master to verify
that data were recorded. A backup copy of the tape is made at that time as well. Navigation data were copied from
the acquisition computer to the data archive. A metadata extractor (glofilter.py, version 3/17/06) was run to
summarize the navigation data and test for errors. If errors were detected in a record, a copy of the data file
was made (the 'a.glo' file mentioned above), that record was automatically flagged as invalid, and corrections
were made if possible. This file's header was updated to document what type of processing occurred. A metadata
file was recorded in the data archive in the same location as the navigation data. Processed navigation data were
then imported to ArcGIS 9.x.
20060331
Pacific Islands Benthic Habitat Mapping Center (PIBHMC), Coral Reef Ecosystem Division (CRED), Pacific Islands Fisheries Science Center (PIFSC), National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric Administration (NOAA)
John Rooney
mailing and physical address
NOAA IRC
NMFS/PIFSC/CRED
1845 WASP Blvd., Building 176
Honolulu
HI
96818
808 725-5360
808 725-5429
nmfs.pic.credinfo@noaa.gov
e-mail preferred
Offline Data
These data are not to be used for navigational purposes. NOAA makes no warranty regarding these
data, expressed or implied, nor does the fact of distribution constitute such a warranty. NOAA cannot assume liability
for any damages caused by any errors or omissions in these data, nor as a result of the failure of these data to
function on a particular system.
ASCII
Each comma-delimited record contains information on the UTC date and time, latitude,
longitude, velocity north and east of the ship, water depth of the seafloor below the transducer (to find the
total depth from the water surface to the seafloor add 5 m to these values to account for the depth of the
tranducer) layback, and wing angle.
List of navigation files:
The shapefiles showing camera sled tracks listed below consist of a collection of files with the names listed
below, followed by these extensions: .dbf, .shp, .shx, and .prj. All file types are necessary to properly
displaying the source data.
List of Navigation files:
JOH04006.glo
JOH04007.glo
JOH04008.glo
JOH04011.glo
JOH04012.glo
JOH04015.glo
JOH04016.glo
JOH04017a.glo
CD-ROM
ISO 9660
VHS, miniDV
A total of 8 separate segments of video data are available.
These data were recorded on 4 video tapes
List of video tapes:
JOH04006-008, VHS, Master
JOH04010-011, VHS, Master
JOH04012,015, VHS, Master
JOH04016-017, VHS, Master
JOH04006-008a, Mini DV, Master
JOH04006-008b, Mini DV, Master
JOH04010-011a, Mini DV, Master
JOH04010-011b, Mini DV, Master
JOH04012,015a Mini DV, Master
JOH04012,015b, Mini DV, Master
JOH04016-017a, Mini Dv, Master
JOH04016-017b, Mini DV, Master
JOH04006-008a, Mini DV, Backup
JOH04006-008b, Mini DV, Backup
JOH04010-011a, Mini DV, Backup
JOH04010-011b, Mini DV, Backup
JOH04012,015a Mini DV, Backup
JOH04012,015b, Mini DV, Backup
JOH04016-017a, Mini Dv, Backup
JOH04016-017b, Mini DV, Backup
Video cassette tape
miniDV
None
20200708
Pacific Islands Benthic Habitat Mapping Center (PIBHMC), Coral Reef Ecosystem Division (CRED), Pacific Islands Fisheries Science Center (PIFSC), National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric Administration (NOAA)
CRED Data Management Team
mailing and physical address
NOAA IRC
NMFS/PIFSC/CRED
1845 WASP Blvd., Building 176
Honolulu
HI
96818
808 725-5360
808 725-5429
nmfs.pic.credinfo@noaa.gov
e-mail preferred
FGDC Content Standard for Digital Geospatial Metadata
FGDC-STD-001-1998
20080502062209
None
20040113
20040115
https://www.coris.noaa.gov/metadata/records/html/cred_toad_johnston_oes0401_2004.html
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